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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6010472 chr22:49157038 A/T PLXNB2 chr22:50713408-50746056:- 0.46 6.73 4.82E-11 Box Plot
THCA rs6010472 chr22:49157038 A/T PMM1 chr22:41972898-41985894:- 0.51 6.43 3.04E-10 Box Plot
THCA rs6010472 chr22:49157038 A/T POLDIP3 chr22:42979727-43010968:- 0.59 7.51 2.93E-13 Box Plot
THCA rs6010472 chr22:49157038 A/T POLR2F chr22:38348614-38437922:+ 0.51 7.69 8.62E-14 Box Plot
THCA rs6010472 chr22:49157038 A/T POLR3H chr22:41921808-41940610:- 0.75 8.84 1.9E-17 Box Plot
THCA rs6010472 chr22:49157038 A/T PPARA chr22:46546424-46639653:+ 0.45 6.29 7.12E-10 Box Plot
THCA rs6010472 chr22:49157038 A/T PPIL2 chr22:22020298-22054304:+ 0.69 8.26 1.4E-15 Box Plot
THCA rs6010472 chr22:49157038 A/T RABL2B chr22:51205929-51222091:- 0.58 6.71 5.58E-11 Box Plot
THCA rs6010472 chr22:49157038 A/T RANBP1 chr22:20103461-20114880:+ 0.54 6.77 3.77E-11 Box Plot
THCA rs6010472 chr22:49157038 A/T RANGAP1 chr22:41641615-41682255:- 0.45 5.95 5.28E-9 Box Plot
THCA rs6010472 chr22:49157038 A/T RBM9 chr22:36134784-36424585:- 0.39 5.99 4.11E-9 Box Plot
THCA rs6010472 chr22:49157038 A/T RBX1 chr22:41347351-41369313:+ 0.53 8.65 7.76E-17 Box Plot
THCA rs6010472 chr22:49157038 A/T RHBDD3 chr22:29655841-29664198:- 0.52 7.1 4.48E-12 Box Plot
THCA rs6010472 chr22:49157038 A/T RNF185 chr22:31556169-31603005:+ 0.64 7.3 1.21E-12 Box Plot
THCA rs6010472 chr22:49157038 A/T RNF215 chr22:30764800-30817760:- 0.64 8.14 3.43E-15 Box Plot